Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARID3A

Gene Name Gene ID Reads Annotation
ARID3A ENSGALG00000026231 867 AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]











Genes with expression patterns similar to ARID3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARID3A ENSGALG00000026231 867 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
2. MLLT3 ENSGALG00000015078 502 1.714 - - 0.915 - - - - - 0.799 - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
3. FAM134C 860 1.708 - - 0.915 - - - 0.793 - - - family with sequence similarity 134 member C
4. UEVLD ENSGALG00000006342 164 1.684 - - 0.926 - - - - 0.758 - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
5. CTNS ENSGALG00000004628 1358 1.643 - - 0.850 - - - - - 0.793 - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
6. TUBA4A ENSGALG00000000433 1367 1.634 - - 0.930 - - - - - 0.704 - tubulin alpha 4a
7. CYTH1 ENSGALG00000007093 2453 1.631 - - 0.861 - - - - - 0.770 - cytohesin 1 [Source:NCBI gene;Acc:422085]
8. PPM1F ENSGALG00000039121 26 1.628 - - - - - - 0.885 0.743 - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
9. APTX ENSGALG00000001954 692 1.612 - - 0.897 - - - - - 0.715 - aprataxin [Source:NCBI gene;Acc:395173]
10. PLB1 PLB1 101 1.609 - - - - - - 0.836 0.773 - -
11. SUZ12 ENSGALG00000003277 177 1.568 - - - - - - 0.842 0.726 - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
12. ADPRHL2 ENSGALG00000002304 2674 1.547 - - 0.796 - - - - - 0.751 - ADP-ribosylhydrolase like 2 [Source:NCBI gene;Acc:419626]
13. RTN4RL2 ENSGALG00000032903 809 1.507 - - - - - - - 0.779 0.728 - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
14. UTP6 ENSGALG00000003260 4909 1.501 - - 0.781 - - - - - 0.720 - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
15. MANF ENSGALG00000002362 7518 1.494 - - 0.758 - - - - - 0.736 - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
16. ARPC1B ENSGALG00000032588 2407 1.448 - - - - - - - 0.745 0.703 - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
17. MRPS5 ENSGALG00000008550 1707 1.439 - - 0.707 - - - 0.732 - - - mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
18. WAPAL WAPAL 625 0.95 - - 0.950 - - - - - - -
19. ABCE1 ENSGALG00000009961 958 0.945 - - 0.945 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
20. RALGAPA2 240 0.941 - - 0.941 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
21. BBX ENSGALG00000015353 1281 0.939 - - 0.939 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
22. SLK ENSGALG00000008318 2220 0.937 - - 0.937 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
23. MAPRE3 ENSGALG00000031726 191 0.936 - - 0.936 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
24. ATP8B4 ENSGALG00000002326 456 0.935 - - 0.935 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
25. RFK ENSGALG00000033558 1364 0.932 - - 0.932 - - - - - - - riboflavin kinase, transcript variant X3
26. PTCD3 ENSGALG00000015773 3059 0.931 - - 0.931 - - - - - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
27. TMEM242 ENSGALG00000013689 377 0.931 - - 0.931 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
28. STAMBP ENSGALG00000042555 1362 0.931 - - 0.931 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
29. STXBP6 ENSGALG00000009847 224 0.931 - - 0.931 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
30. F2R ENSGALG00000014983 106 0.93 - - 0.930 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
31. OSGIN2 ENSGALG00000042840 83 0.93 - - 0.930 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
32. TCTN2 ENSGALG00000023683 3596 0.929 - - 0.929 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
33. IFT81 ENSGALG00000003854 2534 0.929 - - 0.929 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
34. DBN1 ENSGALG00000033405 216 0.928 - - 0.928 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
35. ENSGALG00000020103 ENSGALG00000020103 64 0.928 - - 0.928 - - - - - - -
36. TMEM200A ENSGALG00000002282 77 0.928 - - - - - - 0.928 - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
37. RECQL ENSGALG00000013174 1323 0.928 - - 0.928 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
38. SZT2 ENSGALG00000028561 255 0.928 - - 0.928 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
39. SLC3A1 ENSGALG00000009973 608 0.928 - - 0.928 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
40. PTDSS2 ENSGALG00000004300 682 0.927 - - 0.927 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
41. NXPE3 ENSGALG00000015344 111 0.927 - - 0.927 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
42. PCYT1B 190 0.926 - - 0.926 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
43. MRC2 ENSGALG00000000461 48 0.926 - - 0.926 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
44. CLEC16A ENSGALG00000007167 66 0.926 - - 0.926 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
45. L3MBTL3 ENSGALG00000034030 113 0.926 - - 0.926 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
46. TRIM13 ENSGALG00000017011 92 0.926 - - 0.926 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
47. TDRD6 48 0.926 - - 0.926 - - - - - - - tudor domain containing 6
48. ITGB4 ENSGALG00000002389 44 0.926 - - 0.926 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
49. ATF7IP ENSGALG00000011814 1571 0.925 - - 0.925 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
50. NGF ENSGALG00000002556 122 0.925 - - 0.925 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
51. ENSGALG00000028964 ENSGALG00000028964 46 0.925 - - 0.925 - - - - - - -
52. ADK ENSGALG00000005057 199 0.925 - - 0.925 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
53. KDM6A ENSGALG00000016217 2302 0.925 - - 0.925 - - - - - - - lysine demethylase 6A, transcript variant X14
54. TUBGCP3 ENSGALG00000016836 332 0.924 - - 0.924 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
55. FBXL5 ENSGALG00000014510 245 0.924 - - 0.924 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
56. BAG5 ENSGALG00000031062 4498 0.924 - - 0.924 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
57. ENSGALG00000002020 ENSGALG00000002020 183 0.924 - - 0.924 - - - - - - -
58. RQCD1 RQCD1 110 0.924 - - 0.924 - - - - - - -
59. MED12 ENSGALG00000036322 814 0.924 - - 0.924 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
60. ENSGALG00000004703 ENSGALG00000004703 112 0.924 - - 0.924 - - - - - - -
61. TTPAL ENSGALG00000004244 2734 0.923 - - 0.923 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
62. ZNF639 ENSGALG00000005944 6387 0.923 - - 0.923 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
63. RAD54L2 ENSGALG00000003243 187 0.923 - - 0.923 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
64. U4 U4 69 0.923 - - 0.923 - - - - - - -
65. CDC14B ENSGALG00000012627 110 0.923 - - 0.923 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
66. ABCC3 ENSGALG00000007522 340 0.923 - - 0.923 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
67. AKAP10 ENSGALG00000004679 103 0.922 - - 0.922 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
68. SGCE ENSGALG00000009670 3070 0.922 - - 0.922 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
69. PRUNE PRUNE 452 0.922 - - 0.922 - - - - - - -
70. SMARCAD1 ENSGALG00000037339 149 0.922 - - 0.922 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
71. CCDC175 17 0.921 - - - - - - 0.921 - - - coiled-coil domain containing 175
72. RPS6KB1 ENSGALG00000005198 169 0.92 - - 0.920 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
73. BBS5 ENSGALG00000009846 344 0.92 - - 0.920 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
74. GTF2H2 ENSGALG00000002399 2361 0.92 - - 0.920 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
75. SEPHS1 ENSGALG00000014575 10701 0.919 - - 0.919 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
76. ITM2B ENSGALG00000016996 1112 0.919 - - 0.919 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
77. SLC37A3 ENSGALG00000012849 836 0.919 - - 0.919 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
78. PCDH17 ENSGALG00000016941 1006 0.918 - - 0.918 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
79. KCTD3 ENSGALG00000009678 335 0.918 - - 0.918 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
80. PTPN2 ENSGALG00000013867 1128 0.918 - - 0.918 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
81. SMOC2 ENSGALG00000011205 340 0.916 - - 0.916 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
82. GGT7 ENSGALG00000001062 476 0.915 - - 0.915 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
83. CEP104 ENSGALG00000000978 1130 0.915 - - 0.915 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
84. TFAP2C ENSGALG00000007690 768 0.915 - - 0.915 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
85. SELM SELM 6366 0.915 - - 0.915 - - - - - - -
86. C18orf8 C18orf8 1512 0.915 - - 0.915 - - - - - - -
87. GFER ENSGALG00000005579 1367 0.915 - - 0.915 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
88. CHAMP1 ENSGALG00000016813 508 0.914 - - 0.914 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
89. ENSGALG00000008689 ENSGALG00000008689 232 0.914 - - 0.914 - - - - - - -
90. HIVEP1 ENSGALG00000012739 352 0.914 - - - - - - - - 0.914 - human immunodeficiency virus type I enhancer binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4920]
91. DCP1B 1306 0.914 - - 0.914 - - - - - - - decapping mRNA 1B
92. LRRC71 ENSGALG00000027351 695 0.913 - - 0.913 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
93. GDPD4 ENSGALG00000000690 824 0.913 - - 0.913 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
94. NACAD 679 0.912 - - 0.912 - - - - - - - NAC alpha domain containing, transcript variant X1
95. LRRC42 ENSGALG00000010743 384 0.911 - - 0.911 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
96. MT1 MT1 218 0.91 - - - - - - 0.910 - - -
97. MBSP MBSP 5634 0.91 - - 0.910 - - - - - - -
98. YBX3 ENSGALG00000031890 819 0.908 - - 0.908 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
99. SNN ENSGALG00000028876 1687 0.907 - - 0.907 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
100. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.906 - - 0.906 - - - - - - -

There are 622 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA