Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ALX1

Gene Name Gene ID Reads Annotation
ALX1 ENSGALG00000027213 3141 ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]











Genes with expression patterns similar to ALX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ALX1 ENSGALG00000027213 3141 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]
2. GPR37 ENSGALG00000040954 3566 2.3 - - 0.715 0.732 0.853 - - - - - G protein-coupled receptor 37 [Source:NCBI gene;Acc:417748]
3. SVEP1 ENSGALG00000015721 4026 1.613 - - - - 0.835 - - - 0.778 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
4. C2orf40 ENSGALG00000043690 7790 1.479 - - - 0.750 0.729 - - - - - chromosome 2 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:24642]
5. DAB2 ENSGALG00000003803 6143 1.471 - 0.737 - - 0.734 - - - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
6. DCDC2 ENSGALG00000042454 2306 1.419 - - - 0.702 - - - - - 0.717 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
7. HAPLN1 ENSGALG00000015627 14942 0.873 - - - - 0.873 - - - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
8. LUM ENSGALG00000011271 44020 0.841 - - - - 0.841 - - - - - lumican [Source:NCBI gene;Acc:417891]
9. EMX2 ENSGALG00000009302 2103 0.837 - - - - - - - - 0.837 - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
10. ITIH2 ENSGALG00000006833 8 0.837 - - - - - 0.837 - - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:NCBI gene;Acc:419110]
11. RUNX2 ENSGALG00000040276 499 0.832 - - - - - - - - 0.832 - runt related transcription factor 2 [Source:NCBI gene;Acc:373919]
12. TNC ENSGALG00000039990 3758 0.819 - - - - - - - 0.819 - - tenascin C [Source:NCBI gene;Acc:396440]
13. ASB9 ENSGALG00000016563 2780 0.819 - - - - - - 0.819 - - - ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
14. S100A11 ENSGALG00000036711 23454 0.818 - - - - 0.818 - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
15. OSR2 ENSGALG00000037695 2010 0.809 - - - - - - - - 0.809 - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
16. RNF149 ENSGALG00000016779 172 0.798 - - - - - - - 0.798 - - ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]
17. CDH17 ENSGALG00000035094 521 0.795 - - - - - - - - - 0.795 cadherin 17 [Source:NCBI gene;Acc:420225]
18. HTRA1 ENSGALG00000041140 1750 0.792 - - - - - - 0.792 - - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
19. CSRP2 ENSGALG00000029921 6629 0.792 - - - - 0.792 - - - - - cysteine and glycine rich protein 2 [Source:NCBI gene;Acc:396128]
20. GPX3 ENSGALG00000004521 10856 0.792 - - - - 0.792 - - - - - glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
21. CYP24A1 ENSGALG00000042279 43 0.79 - - - - - - - - - 0.790 cytochrome P450 family 24 subfamily A member 1 [Source:NCBI gene;Acc:395827]
22. TBX18 ENSGALG00000032789 1768 0.79 - - - - - - 0.790 - - - T-box 18 [Source:NCBI gene;Acc:395104]
23. FBN2 ENSGALG00000014686 4538 0.784 - - - - - - 0.784 - - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
24. PLPPR4 ENSGALG00000025896 120 0.784 - - - - - - - - - 0.784 phospholipid phosphatase related 4 [Source:HGNC Symbol;Acc:HGNC:23496]
25. ITGB3 ENSGALG00000000379 1969 0.779 - - - - 0.779 - - - - - integrin subunit beta 3 [Source:NCBI gene;Acc:374209]
26. IL1R1 ENSGALG00000043044 713 0.778 - - 0.778 - - - - - - - interleukin 1 receptor type 1 [Source:NCBI gene;Acc:396481]
27. CO6 CO6 1623 0.777 - - - - 0.777 - - - - -
28. MDK ENSGALG00000008367 316136 0.776 - - - - 0.776 - - - - - midkine [Source:NCBI gene;Acc:423196]
29. KCTD6 ENSGALG00000007111 3557 0.763 - - - - - - 0.763 - - - potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]
30. LGALS3 ENSGALG00000012173 3306 0.762 - - - - - - - - - 0.762 galectin 3 [Source:NCBI gene;Acc:373917]
31. BMPER ENSGALG00000029811 636 0.756 - - - - - - 0.756 - - - BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
32. MKP3 MKP3 4418 0.755 - - - - - - 0.755 - - -
33. RAMP2 ENSGALG00000024449 5860 0.752 - - - - - - 0.752 - - - receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
34. MEIS2 ENSGALG00000039118 81591 0.751 - - 0.751 - - - - - - - Meis homeobox 2 [Source:NCBI gene;Acc:395588]
35. PIGA ENSGALG00000016559 5010 0.751 - - - - - - 0.751 - - - phosphatidylinositol glycan anchor biosynthesis class A [Source:NCBI gene;Acc:418624]
36. SNAI1 ENSGALG00000008018 3930 0.75 - - - - - - 0.750 - - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
37. ACTG2 ENSGALG00000041634 4529 0.75 - - - - 0.750 - - - - - actin, gamma 2, smooth muscle, enteric [Source:NCBI gene;Acc:396084]
38. TAGLN ENSGALG00000011902 12030 0.749 - - - - 0.749 - - - - - transgelin [Source:NCBI gene;Acc:396490]
39. PRRX2 ENSGALG00000028236 1990 0.748 - - - - 0.748 - - - - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
40. ASTL ENSGALG00000037220 2775 0.748 - - - - - - - 0.748 - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
41. TANC1 ENSGALG00000012570 4196 0.747 - - - - - - 0.747 - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
42. CAPN5 ENSGALG00000040478 2414 0.747 - - - - - - - - - 0.747 calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
43. TUBB6 ENSGALG00000031275 17690 0.743 - - 0.743 - - - - - - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
44. ENSGALG00000011906 ENSGALG00000011906 181 0.742 - - - - - - - 0.742 - -
45. RBPMS ENSGALG00000010291 3663 0.739 - - 0.739 - - - - - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
46. SGK1 ENSGALG00000013971 2608 0.739 - - - - - 0.739 - - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
47. TEK ENSGALG00000001840 1365 0.738 - - - - - - 0.738 - - - TEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]
48. TOR4A ENSGALG00000008623 1364 0.736 - - - - 0.736 - - - - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
49. NANOS1 ENSGALG00000027980 801 0.735 - - - - - - 0.735 - - - nanos C2HC-type zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:23044]
50. HGF/SF HGF/SF 345 0.735 - - - - - - 0.735 - - -
51. MPL ENSGALG00000009965 334 0.734 - - - - - 0.734 - - - - MPL proto-oncogene, thrombopoietin receptor [Source:NCBI gene;Acc:414804]
52. PHLDA2 ENSGALG00000032687 7733 0.734 - - - - - - 0.734 - - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
53. KIF5C ENSGALG00000012462 167 0.733 - - - - - - - 0.733 - - kinesin family member 5C [Source:NCBI gene;Acc:408046]
54. ARPC1B ENSGALG00000032588 2407 0.731 - - - - 0.731 - - - - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
55. GILT GILT 1343 0.729 - - - - 0.729 - - - - -
56. CSRP1 ENSGALG00000000318 3702 0.729 - - - - 0.729 - - - - - cysteine and glycine rich protein 1 [Source:NCBI gene;Acc:396176]
57. ANO1 ENSGALG00000041808 5149 0.729 - - - 0.729 - - - - - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
58. SPARC ENSGALG00000004184 36410 0.729 - - - - 0.729 - - - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
59. THBS4 ENSGALG00000014804 4228 0.728 - - - - 0.728 - - - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
60. OSR1 ENSGALG00000016473 1202 0.727 - - - - - - 0.727 - - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
61. PPP1R26 ENSGALG00000002489 45 0.726 - - - - - - - - - 0.726 protein phosphatase 1 regulatory subunit 26 [Source:HGNC Symbol;Acc:HGNC:29089]
62. EYA1 ENSGALG00000043033 1048 0.726 - - - - - - - 0.726 - - EYA transcriptional coactivator and phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3519]
63. MPZL3 ENSGALG00000021271 1857 0.724 - - - - - - - - - 0.724 myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
64. COL5A2 ENSGALG00000031112 18358 0.724 - - - - - - 0.724 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
65. MME ENSGALG00000010331 757 0.724 - - - - - - 0.724 - - - membrane metalloendopeptidase [Source:NCBI gene;Acc:425031]
66. DPP4 ENSGALG00000042452 444 0.724 - - - - - - - - 0.724 - dipeptidyl peptidase 4 [Source:NCBI gene;Acc:424187]
67. ADM ENSGALG00000046593 1837 0.723 - - - - 0.723 - - - - - adrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]
68. ENSGALG00000011516 ENSGALG00000011516 24 0.722 - - - - - - - - - 0.722
69. TEAD1 ENSGALG00000005415 194 0.722 - - - - - - - 0.722 - - TEA domain transcription factor 1 [Source:NCBI gene;Acc:403089]
70. RARRES1 ENSGALG00000009594 3573 0.722 - - - - - - 0.722 - - - retinoic acid receptor responder 1 [Source:NCBI gene;Acc:395209]
71. FRZB ENSGALG00000002763 14833 0.72 - - - - 0.720 - - - - - frizzled related protein [Source:NCBI gene;Acc:395545]
72. ACTN1 ENSGALG00000042458 10477 0.719 - - - - 0.719 - - - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
73. CCDC85A ENSGALG00000043080 7624 0.718 - - 0.718 - - - - - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
74. PKN2 ENSGALG00000006237 37 0.718 - - - - - 0.718 - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
75. ANGPT4 ENSGALG00000040755 489 0.716 - - - - - - - - - 0.716 angiopoietin 4 [Source:HGNC Symbol;Acc:HGNC:487]
76. CYP2J22 ENSGALG00000011394 76 0.714 - - - - - 0.714 - - - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
77. ELTD1 ELTD1 995 0.714 - - - - - - 0.714 - - -
78. RAC2 ENSGALG00000012456 987 0.714 - - - - 0.714 - - - - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
79. SSFA2 2288 0.712 - - - - - - - - 0.712 - sperm specific antigen 2, transcript variant X2
80. PRDM6 ENSGALG00000005351 2078 0.712 - - - - - - - - 0.712 - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
81. ARSB ENSGALG00000004438 244 0.711 - - - - - - - - - 0.711 arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
82. FN3K ENSGALG00000001531 208 0.709 - - - - - - - 0.709 - - fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
83. TNFIP6 TNFIP6 3024 0.708 - - - - 0.708 - - - - -
84. LEPREL4 LEPREL4 5609 0.708 - - - - - - 0.708 - - -
85. WNT5A ENSGALG00000034168 10160 0.708 - - - - - - - - 0.708 - Wnt family member 5A [Source:NCBI gene;Acc:395703]
86. VCAN ENSGALG00000015624 11489 0.705 - - - - - - 0.705 - - - versican [Source:NCBI gene;Acc:395565]
87. C9orf89 C9orf89 3056 0.705 - - - - - - 0.705 - - -
88. COL1A2 ENSGALG00000009641 46236 0.704 - - - - 0.704 - - - - - collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
89. ZFYVE20 ZFYVE20 132 0.704 - - - - - - - 0.704 - -
90. SERPINB2 135 0.703 - - - - - 0.703 - - - - serpin family B member 2
91. ADAMTS1 ENSGALG00000040342 2741 0.702 - - - - 0.702 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 1 [Source:HGNC Symbol;Acc:HGNC:217]
92. NCF4 ENSGALG00000038141 216 0.702 - - - - 0.702 - - - - - neutrophil cytosolic factor 4 [Source:NCBI gene;Acc:418052]
93. SHISA5 ENSGALG00000004661 8573 0.701 - - - - - - 0.701 - - - shisa family member 5 [Source:NCBI gene;Acc:415948]
94. PTPRR ENSGALG00000010148 93 0.701 - - - - - - - 0.701 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
95. ELOVL7 ENSGALG00000014730 1820 0.7 - - - - 0.700 - - - - - ELOVL fatty acid elongase 7 [Source:NCBI gene;Acc:431579]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA